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- Volume 26, Issue 4, 2023
Combinatorial Chemistry & High Throughput Screening - Volume 26, Issue 4, 2023
Volume 26, Issue 4, 2023
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Identification of Hub Genes Associated with Tumor-Infiltrating Immune Cells and ECM Dynamics as the Potential Therapeutic Targets in Gastric Cancer through an Integrated Bioinformatic Analysis and Machine Learning Methods
Authors: Jie Liu and Zhong ChengBackground: Stomach cancer, also known as gastric adenocarcinoma, remains the most common and deadly cancer worldwide. Its early diagnosis and prevention are effective to improve the 5-year survival rate of the patients. Therefore, it is important to discover specific biomarkers for early diagnosis and drug treatment. This study investigates the potential key genes and signaling pathways involved in gastric cancer. Method Read More
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A Review on Benzimidazole Scaffolds as Inhibitors of Mycobacterium tuberculosis Mycolyl-arabinogalactan-peptidoglycan Complex Biosynthesis
Background: Tuberculosis is one of the oldest known infectious diseases to mankind, caused by Mycobacterium tuberculosis. Although current treatment using first-line anti-tubercular drugs is proven to be effective, an infection caused by resistant strains, as in multidrug-resistant and extensive drug- resistant tuberculosis is still an impending challenge to treat. Objective: Our objective is to focus on reporting benzimida Read More
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Prognostic and Immunological Significance of Rhomboid Domain Containing Protein 1 in Multiple Primary Cancers
Authors: Tongbo Wang, Xiaojie Zhang, Wenjie Liu, Chongyuan Sun, Zefeng Li and Dongbing ZhaoBackground: RHBDD1 is an intramembrane serine protease of the rhomboid superfamily that regulates diverse physiological and pathological processes. However, the relationship between RHBDD1 expression, tumor-infiltrating immune cells (TIICs), and cancer prognosis remains unclear. Objective: We comprehensively analyzed the prognostic and immunological significance of RHBDD1 in multiple primary cancers. Method Read More
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In Silico Optimization of Frizzled-8 Receptor Inhibition Activity of Carbamazepine: Designing New Anti-Cancer Agent
Authors: Roya Ahmadi, Bakhtyar Sepehri, Mehdi Irani and Raouf GhavamiBackground: Frizzled-8 (FZD8) receptor is a therapeutic target for cancer treatment and recent research has shown that carbamazepine (CBZ) can inhibit this receptor. Objective: In this work, it has been tried to optimize CBZ to enhance its binding capacity to the N6W binding site of FZD8 by using structure-based drug design methods. Methods: CBZ and its 83 derivatives were docked to the N6W binding site of FZD8. Results: Read More
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Network Pharmacology-based Strategy to Investigate Pharmacological Mechanisms of Qingbutongluo Pill for Treatment of Brucellosis
Authors: Jing Wang, Jia-Wei He, Ji-Shan Liu, Jian-E Li, Qing-You Cui, Yi-Rui Wang and Wei-Gang ZhouBackground and Objectives: Qingbutongluo pill (QBTLP), a Chinese herbal preparation, has been developed to treat brucellosis for many years with a good therapeutic effect. This study preliminarily explored its potential molecular mechanisms against brucellosis through network pharmacology. Methods: The active ingredients of QBTLP were screened out mainly from the Traditional Chinese medicine systems pharmacology data Read More
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Screening of Key Part in IFN Pathway for Herpes Zoster: Evidence from Bioinformatics Analysis
Authors: Zimeng Li, Jie Wu, Shijie Huang, Zhengqi Pan and Jing HuangBackground: Herpes zoster is one of the most common diseases in middle and old ages, and the incidence rate is constantly increasing. Long-term, severe neuropathological pain continues to afflict the patients, causing trouble and even the inability to live a normal life. Since the occurrence and development of herpes zoster are related to many mechanisms, there is no uniform conclusion and specific treatment method, and onl Read More
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Identification of Hypoxia-related Genes in Acute Myocardial Infarction using Bioinformatics Analysis
Authors: Huasong Xia, Yi Chen, Qiang Chen and Yanqing WuBackground: Acute myocardial infarction (AMI) remains one of the most fatal diseases worldwide. Persistent ischemia and hypoxia are implicated as significant mechanisms in the development of AMI. However, no hypoxia-related gene targets of AMI have been identified to date. This study aimed to identify potential genes and drugs for AMI using bioinformatics analysis. Materials and Methods: Two datasets both related to A Read More
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To Explore the Mechanism of “Fuzi-Guizhi” for the Treatment of Osteoarthritis on the Basis of Network Pharmacology and Molecular Docking
Authors: De-Ta Chen, Xue Shen, Yu-Mei Li, Lin Chen, Yan-Bin Pan, Xiao-Ping Sheng, Wu Rao, Xiao-Liang Xie, Jing-Liang Gu, Hai-Xia Zhu, Tian-You Fan and Min-Lei QiuObjective: The objective of this study is to analyze and verify the main drug components and targets of "Fuzi-Guizhi" in the treatment of osteoarthritis by using the network pharmacology platform. Methods: The integrated pharmacology of "Fuzi-Guizhi" was analyzed by using the platform of integrated pharmacology of traditional Chinese medicine to explore its mechanism in the treatment of osteoarthritis. By est Read More
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Identification and Validation of Co-Expressed Immune-Related Gene Signature Affecting the Pattern of Immune Infiltrating in Esophageal Cancer
Authors: Rui Cheng, Hao Zeng, Linyan Chen, Lixing Zhou and Birong DongObjective: Esophageal squamous cell carcinoma (ESCC) is a common malignant tumor of the digestive tract, and its molecular mechanisms have not been fully clarified. This study aimed to evaluate the immune infiltration pattern of esophageal cancer through a gene co-expression network, and to provide biomarkers for immunotherapy of esophageal cancer. Methods: We downloaded RNA-seq data of ESCC samples from GS Read More
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Alz-Disc: A Tool to Discriminate Disease-causing and Neutral Mutations in Alzheimer's Disease
Authors: A. Kulandaisamy, S. A. Parvathy Dharshini and M. Michael GromihaBackground: Alzheimer's disease (AD) is the most common neurodegenerative disorder that affects the neuronal system and leads to memory loss. Many coding gene variants are associated with this disease and it is important to characterize their annotations. Methods: We collected the Alzheimer's disease-causing and neutral mutations from different databases. For each mutation, we computed the different features fro Read More
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Transcriptome Analysis of Traditional Chinese Medicine ‘Kechuanning Plaster’ in the Treatment of Asthma
Authors: Yanbo Fan, Wei Wang, Zhiwei He, Jingjing Li, Nian Ding, Lijun Lu, Jun Zhang and Miaomiao XieBackground: Asthma is a severe chronic inflammatory airway disease. Kechuanning plaster has excellent efficacy in the treatment of asthma. Objective: The aim of this study was to analyze the molecular mechanisms of Kechuanning plaster in the treatment of asthma. Methods: An asthma model was constructed using Sprague Dawley rats. Differentially expressed genes (DEGs) were screened in three rat groups: the control Read More
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Identification of Genes as Potential Biomarkers for Sepsis-related ARDS using Weighted Gene Co-expression Network Analysis
Authors: Xiaowan Wang and Aihua FeiBackground: Acute respiratory distress syndrome (ARDS) caused by sepsis presents a high mortality rate; therefore, identification of susceptibility genes of sepsis to ARDS at an early stage is particularly critical. Methods: The GSE66890 dataset was downloaded and analyzed by WGCNA to obtain modules. Then, GO and KEGG analyses of the module genes were performed. Then, the PPI network and LASSO model were con Read More
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Establishment of a High Throughput Screening System for GABAA1 Modulators in Living Cells
Authors: Yi Zhang, Tong Shi, Xuejun Chen, Ruihua Zhang, Jingjing Shi, Qian Jin, Jianfu Xu, Chen Wang and Liqin LiBackground: The incidence of sleep disorders is more than 27% in the worldwide, and the development of novel sleep drugs that target GABAA receptors is of great interest. Traditional drug screening methods restrict the discovery of lead compounds, the high-throughput screening system is a powerful means for the lead compounds discovery of sleep drug. Methods: The GABAA1-CHO cell line stably expressing α1β2γ2L wa Read More
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Expression of MCMs in Endometrial Cancer and its Biological Correlation Analysis
Authors: Yu Zhen, Hanlin Fu, Lulu Si, Tianjiao Lai, Danxia Chu and Ruixia GuoPurpose: Minichromosome maintenance (MCM) has been demonstrated to be involved in tumorigenesis and pathogenesis of many cancer types. However, the role of MCMs in endometrial cancer (EC) has not been elucidated. Materials and Methods: We first employed GEPIA, cBioPortal, and R software to perform the differential expression analysis, survival analysis, and gene alteration analysis of the MCMs family. Then, GSE17 Read More
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Inhibitory Effect of Verapamil on the Growth of Human Airway Granulation Fibroblasts
Authors: Bo Cai, Bing Yuan, Jinghua Cui, Jing Li and Yunhui ZhangObjectives: To explore the inhibitory effect of verapamil, a calcium channel blocker, on the growth of human airway granulation fibroblasts to provide an experimental basis for the clinical use of calcium channel blockers in preventing and treating benign airway stenosis. Methods: Primary human airway normal fibroblasts and human airway granulation fibroblasts were cultured by tissue block attachment culture method, a Read More
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Resveratrol Ameliorates LPS-induced Acute Lung Injury Mouse Model via Induction of Tristetraprolin
Authors: Yonghong Zhang, Guizuo Wang, Dexin Zhang and Xiuzhen SunAim: In this study, we aimed to investigate whether resveratrol has anti-inflammatory effects on LPS-induced ALI via TTP enhancement. Background: Acute lung injury (ALI) is a syndrome of diffuse infammatory lung injury with increased pulmonary edema and the rapid onset of hypoxemic respiratory failure. Resveratrol is a stilbenoid, a form of natural phenol, and a phytoalexin produced by a variety of plants in r Read More
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Dendrobium officinalis Six Nostrum Promotes Intestinal Urate Underexcretion via Regulations of Urate Transporter Proteins in Hyperuricemic Rats
Authors: Hongzhang Ge, Zetian Jiang, Bo Li, Peiyao Xu, Hansong Wu, Xinglishang He, Wanfeng Xu, Zhi Huang, Taoxiu Xiong, Ping Wang, Guiyuan Lv and Suhong ChenBackground: Dendrobium officinalis Six nostrum (DOS) can be prepared by adding Dendrobium officinalis into Simiao Wan in accordance with the Traditional Chinese Medicine (TCM) theory and other previous findings. Our previous study has shown that DOS treatment can lead to a marked decrease in Serum UA (SUA) levels. The purpose of this study was to explore the effects of DOS on intestinal UA excretion in hyperurice Read More
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Volumes & issues
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Volume 28 (2025)
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Volume 27 (2024)
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Volume 26 (2023)
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Volume 25 (2022)
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Volume 24 (2021)
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Volume 23 (2020)
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Volume 22 (2019)
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Volume 21 (2018)
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Volume 20 (2017)
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Volume 19 (2016)
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Volume 18 (2015)
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Volume 17 (2014)
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Volume 16 (2013)
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Volume 15 (2012)
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Volume 14 (2011)
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Volume 13 (2010)
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Volume 12 (2009)
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Volume 11 (2008)
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Volume 10 (2007)
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Volume 9 (2006)
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Volume 8 (2005)
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Volume 7 (2004)
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Volume 6 (2003)
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Volume 5 (2002)
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Volume 4 (2001)
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Volume 3 (2000)
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