Recent Directions in Compressing Next Generation Sequencing Data

Malay Bhattacharyya; Manas Bhattacharyya; Sanghamitra Bandyopadhyay

doi:10.2174/157489312799304422

ISSN: 1574-8936
E-ISSN: 2212-392X

Recent Directions in Compressing Next Generation Sequencing Data
By Malay Bhattacharyya, Manas Bhattacharyya and Sanghamitra Bandyopadhyay
Source: Current Bioinformatics, Volume 7, Issue 1, Mar 2012, p. 2 - 6
DOI: https://doi.org/10.2174/157489312799304422
- Available online: 01 Mar 2012

Abstract

Bioinformatics research in the last three decades has contributed quite a large number of methodologies for compressing genomic sequence data. However, recent progress in the next generation sequencing (NGS) techniques requires the development of more effective compression methods. In this review paper, a comprehensive overview of the state-of-the-art DNA sequence compression techniques for handling the exponential growth of DNA sequence data, emerging from NGS techniques, is provided.

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2012-03-01

2024-11-30

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Article Type: Research Article

Keyword(s): Arabidopsis thaliana; Cloud computing; compression ratio; DNA sequence data; genetic disease; genome; next generation sequencing; NGS techniques; sequence compression; single nucleotide polymorphisms

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Recent Directions in Compressing Next Generation Sequencing Data

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